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You're reading from  R for Data Science Cookbook (n)

Product typeBook
Published inJul 2016
Reading LevelIntermediate
Publisher
ISBN-139781784390815
Edition1st Edition
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Author (1)
Yu-Wei, Chiu (David Chiu)
Yu-Wei, Chiu (David Chiu)
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Yu-Wei, Chiu (David Chiu)

Yu-Wei, Chiu (David Chiu) is the founder of LargitData (www.LargitData.com), a startup company that mainly focuses on providing big data and machine learning products. He has previously worked for Trend Micro as a software engineer, where he was responsible for building big data platforms for business intelligence and customer relationship management systems. In addition to being a start-up entrepreneur and data scientist, he specializes in using Spark and Hadoop to process big data and apply data mining techniques for data analysis. Yu-Wei is also a professional lecturer and has delivered lectures on big data and machine learning in R and Python, and given tech talks at a variety of conferences. In 2015, Yu-Wei wrote Machine Learning with R Cookbook, Packt Publishing. In 2013, Yu-Wei reviewed Bioinformatics with R Cookbook, Packt Publishing. For more information, please visit his personal website at www.ywchiu.com. **********************************Acknowledgement************************************** I have immense gratitude for my family and friends for supporting and encouraging me to complete this book. I would like to sincerely thank my mother, Ming-Yang Huang (Miranda Huang); my mentor, Man-Kwan Shan; the proofreader of this book, Brendan Fisher; Members of LargitData; Data Science Program (DSP); and other friends who have offered their support.
Read more about Yu-Wei, Chiu (David Chiu)

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Recognizing digits using the density-based clustering method


We have already covered density-based clustering methods, which are good at handling data without a certain shape. In this recipe, we demonstrate how to use DBSCAN to recognize digits.

Getting ready

In this recipe, we use handwritten digits as clustering input. You can find the figure on the author's GitHub page at https://github.com/ywchiu/rcookbook/raw/master/chapter12/handwriting.png.

How to do it…

Perform the following steps to cluster digits with different clustering techniques:

  1. First, install and load the png package:

    > install.packages("png")
    > library(png)
    
  2. Read images from handwriting.png and transform the read data into a scatterplot:

    > img2 = readPNG("handwriting.png", TRUE)
    > img3 = img2[,nrow(img2):1]
    > b = cbind(as.integer(which(img3 < -1) %% 28), which(img3 < -1) / 28)
    > plot(b, xlim=c(1,28), ylim=c(1,28))
    

    Figure 12: A scatterplot of handwritten digits

  3. Perform the k-means clustering method on the...

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R for Data Science Cookbook (n)
Published in: Jul 2016Publisher: ISBN-13: 9781784390815

Author (1)

author image
Yu-Wei, Chiu (David Chiu)

Yu-Wei, Chiu (David Chiu) is the founder of LargitData (www.LargitData.com), a startup company that mainly focuses on providing big data and machine learning products. He has previously worked for Trend Micro as a software engineer, where he was responsible for building big data platforms for business intelligence and customer relationship management systems. In addition to being a start-up entrepreneur and data scientist, he specializes in using Spark and Hadoop to process big data and apply data mining techniques for data analysis. Yu-Wei is also a professional lecturer and has delivered lectures on big data and machine learning in R and Python, and given tech talks at a variety of conferences. In 2015, Yu-Wei wrote Machine Learning with R Cookbook, Packt Publishing. In 2013, Yu-Wei reviewed Bioinformatics with R Cookbook, Packt Publishing. For more information, please visit his personal website at www.ywchiu.com. **********************************Acknowledgement************************************** I have immense gratitude for my family and friends for supporting and encouraging me to complete this book. I would like to sincerely thank my mother, Ming-Yang Huang (Miranda Huang); my mentor, Man-Kwan Shan; the proofreader of this book, Brendan Fisher; Members of LargitData; Data Science Program (DSP); and other friends who have offered their support.
Read more about Yu-Wei, Chiu (David Chiu)