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R for Data Science Cookbook (n)

You're reading from  R for Data Science Cookbook (n)

Product type Book
Published in Jul 2016
Publisher
ISBN-13 9781784390815
Pages 452 pages
Edition 1st Edition
Languages
Author (1):
Yu-Wei, Chiu (David Chiu) Yu-Wei, Chiu (David Chiu)
Profile icon Yu-Wei, Chiu (David Chiu)

Table of Contents (19) Chapters

R for Data Science Cookbook
Credits
About the Author
About the Reviewer
www.PacktPub.com
Preface
Functions in R Data Extracting, Transforming, and Loading Data Preprocessing and Preparation Data Manipulation Visualizing Data with ggplot2 Making Interactive Reports Simulation from Probability Distributions Statistical Inference in R Rule and Pattern Mining with R Time Series Mining with R Supervised Machine Learning Unsupervised Machine Learning Index

Clustering data with the density-based method


As an alternative to distance measurement, we can use density-based measurement to cluster data. This method finds area with a higher density than the remaining area. One of the most famous methods is DBSCAN. In the following recipe, we demonstrate how to use DBSCAN to perform density-based clustering.

Getting ready

In this recipe, we will continue to use the hotel location dataset as the input data source to perform DBSCAN clustering.

How to do it…

Please perform the following steps to perform density-based clustering:

  1. First, install and load the dbscan packages:

    > install.packages("dbscan")
    > library(dbscan)
    
  2. Cluster data in regard to its density measurement:

    > fit <- dbscan(hotel.dist, eps = 0.01, minPts = 3)
    > fit
    DBSCAN clustering for 102 objects.
    Parameters: eps = 0.01, minPts = 3
    The clustering contains 4 cluster(s) and 3 noise points.
    
     0  1  2  3  4 
     3 17 65 12  5 
    
    Available fields: cluster, eps, minPts
    
  3. Plot the data in a...

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