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You're reading from  R for Data Science Cookbook (n)

Product typeBook
Published inJul 2016
Reading LevelIntermediate
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ISBN-139781784390815
Edition1st Edition
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Author (1)
Yu-Wei, Chiu (David Chiu)
Yu-Wei, Chiu (David Chiu)
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Yu-Wei, Chiu (David Chiu)

Yu-Wei, Chiu (David Chiu) is the founder of LargitData (www.LargitData.com), a startup company that mainly focuses on providing big data and machine learning products. He has previously worked for Trend Micro as a software engineer, where he was responsible for building big data platforms for business intelligence and customer relationship management systems. In addition to being a start-up entrepreneur and data scientist, he specializes in using Spark and Hadoop to process big data and apply data mining techniques for data analysis. Yu-Wei is also a professional lecturer and has delivered lectures on big data and machine learning in R and Python, and given tech talks at a variety of conferences. In 2015, Yu-Wei wrote Machine Learning with R Cookbook, Packt Publishing. In 2013, Yu-Wei reviewed Bioinformatics with R Cookbook, Packt Publishing. For more information, please visit his personal website at www.ywchiu.com. **********************************Acknowledgement************************************** I have immense gratitude for my family and friends for supporting and encouraging me to complete this book. I would like to sincerely thank my mother, Ming-Yang Huang (Miranda Huang); my mentor, Man-Kwan Shan; the proofreader of this book, Brendan Fisher; Members of LargitData; Data Science Program (DSP); and other friends who have offered their support.
Read more about Yu-Wei, Chiu (David Chiu)

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Measuring prediction performance using ROCR


One obstacle to using a confusion matrix to assess the classification model is that you have to arbitrarily select a threshold to determine the value of the matrix. A possible way to determine the threshold is to visualize the confusion matrix under different thresholds in a Receiver Operating Characteristic (ROC) curve.

An ROC curve is a plot that illustrates the performance of a binary classifier system, and plots the true positive rate against the false positive rate for different cut points. We most commonly use this plot to calculate the area under curve (AUC), to measure the performance of a classification model. In this recipe, we demonstrate how to illustrate a ROC curve and calculate the AUC to measure the performance of a classification model.

Getting ready

You need to have the previous recipes completed by generating a classification model, and assign the model into variable fit.

How to do it…

Perform the following steps to generate two...

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R for Data Science Cookbook (n)
Published in: Jul 2016Publisher: ISBN-13: 9781784390815

Author (1)

author image
Yu-Wei, Chiu (David Chiu)

Yu-Wei, Chiu (David Chiu) is the founder of LargitData (www.LargitData.com), a startup company that mainly focuses on providing big data and machine learning products. He has previously worked for Trend Micro as a software engineer, where he was responsible for building big data platforms for business intelligence and customer relationship management systems. In addition to being a start-up entrepreneur and data scientist, he specializes in using Spark and Hadoop to process big data and apply data mining techniques for data analysis. Yu-Wei is also a professional lecturer and has delivered lectures on big data and machine learning in R and Python, and given tech talks at a variety of conferences. In 2015, Yu-Wei wrote Machine Learning with R Cookbook, Packt Publishing. In 2013, Yu-Wei reviewed Bioinformatics with R Cookbook, Packt Publishing. For more information, please visit his personal website at www.ywchiu.com. **********************************Acknowledgement************************************** I have immense gratitude for my family and friends for supporting and encouraging me to complete this book. I would like to sincerely thank my mother, Ming-Yang Huang (Miranda Huang); my mentor, Man-Kwan Shan; the proofreader of this book, Brendan Fisher; Members of LargitData; Data Science Program (DSP); and other friends who have offered their support.
Read more about Yu-Wei, Chiu (David Chiu)