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You're reading from  Scientific Computing with Python 3

Product typeBook
Published inDec 2016
Reading LevelBeginner
PublisherPackt
ISBN-139781786463517
Edition1st Edition
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Authors (3):
Claus Führer
Claus Führer
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Claus Führer

Claus Führer is a professor of scientific computations at Lund University, Sweden. He has an extensive teaching record that includes intensive programming courses in numerical analysis and engineering mathematics across various levels in many different countries and teaching environments. Claus also develops numerical software in research collaboration with industry and received Lund University's Faculty of Engineering Best Teacher Award in 2016.
Read more about Claus Führer

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Spectral clustering


An interesting application of eigenvectors is for clustering data. Using the eigenvectors of a matrix derived from a distance matrix, unlabelled data can be separated into groups. Spectral clustering methods get their name from the use of the spectrum of this matrix. A distance matrix for n elements (for example, the pairwise distance between data points) is an n × n symmetric matrix. Given such an n × n distance matrix M with distance values mij , we can create the Laplacian matrix of the data points as follows:

Here, I is the identity matrix and D is the diagonal matrix containing the row sums of M,

 

The data clusters are obtained from the eigenvectors of L. In the simplest case of data points with only two classes, the first eigenvector (that is, the one corresponding to the largest eigenvalue) is often enough to separate the data.

Here is an example for simple two-class clustering. The following code creates some 2D data points and clusters them based on the first...

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Scientific Computing with Python 3
Published in: Dec 2016Publisher: PacktISBN-13: 9781786463517

Authors (3)

author image
Claus Führer

Claus Führer is a professor of scientific computations at Lund University, Sweden. He has an extensive teaching record that includes intensive programming courses in numerical analysis and engineering mathematics across various levels in many different countries and teaching environments. Claus also develops numerical software in research collaboration with industry and received Lund University's Faculty of Engineering Best Teacher Award in 2016.
Read more about Claus Führer