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Matplotlib for Python Developers. - Second Edition

You're reading from  Matplotlib for Python Developers. - Second Edition

Product type Book
Published in Apr 2018
Publisher Packt
ISBN-13 9781788625173
Pages 300 pages
Edition 2nd Edition
Languages
Authors (3):
Aldrin Yim Aldrin Yim
Profile icon Aldrin Yim
Claire Chung Claire Chung
Profile icon Claire Chung
Allen Yu Allen Yu
Profile icon Allen Yu
View More author details

Table of Contents (16) Chapters

Title Page
Dedication
Packt Upsell
Contributors
Preface
Introduction to Matplotlib Getting Started with Matplotlib Decorating Graphs with Plot Styles and Types Advanced Matplotlib Embedding Matplotlib in GTK+3 Embedding Matplotlib in Qt 5 Embedding Matplotlib in wxWidgets Using wxPython Integrating Matplotlib with Web Applications Matplotlib in the Real World Integrating Data Visualization into the Workflow Index

Exploring the data nature by the t-SNE method


After visualizing a few images and glimpsing of how the samples are distributed, we will go deeper into our EDA.

Each pixel comes with an intensity value, which makes 64 variables for each 8x8 image. The human brain is not good at intuitively perceiving dimensions higher than three. For high-dimensional data, we need more effective visual aids. 

Dimensionality reduction methods, such as the commonly used PCA and t-SNE, reduce the number of input variables under consideration, while retaining most of the useful information. As a result, the visualization of data becomes more intuitive.

In the following section, we will focus our discussion on the t-SNE method by using the scikit-learn library in Python.

Understanding t-Distributed stochastic neighbor embedding 

The t-SNE method was proposed by van der Maaten and Hinton in 2008 in the publication Visualizing Data using t-SNE. It is a nonlinear dimension reduction method that aims to effectively visualize...

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