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Published inJan 2024
Reading LevelExpert
PublisherPackt
ISBN-139781805127161
Edition3rd Edition
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Osvaldo Martin
Osvaldo Martin
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Osvaldo Martin

Osvaldo Martin is a researcher at CONICET, in Argentina. He has experience using Markov Chain Monte Carlo methods to simulate molecules and perform Bayesian inference. He loves to use Python to solve data analysis problems. He is especially motivated by the development and implementation of software tools for Bayesian statistics and probabilistic modeling. He is an open-source developer, and he contributes to Python libraries like PyMC, ArviZ and Bambi among others. He is interested in all aspects of the Bayesian workflow, including numerical methods for inference, diagnosis of sampling, evaluation and criticism of models, comparison of models and presentation of results.
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9.3 Distributional BART models

As we saw in Chapter 6, for generalized linear models, we are not restricted to creating linear models for the mean or location parameter; we can also model other parameters, for example, the standard deviation of a Gaussian or even both the mean and standard deviation. The same applies to BART models.

To exemplify this, let’s model the bike dataset. We will use rented as the response variable and hour, temperature, humidity, and workday as predictor variables. As we did previously, we are going to use a NegativeBinomial distribution as likelihood. This distribution has two parameters μ and alpha. We are going to use a sum of trees for both parameters. The following code block shows the model:

Code 9.5

with pm.Model() as model_bb: 
    μ = pmb.BART("μ", X, np.log(Y), shape=(2, 348), separate_trees=True) 
    pm.NegativeBinomial('yl', np.exp(μ...
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Bayesian Analysis with Python - Third Edition
Published in: Jan 2024Publisher: PacktISBN-13: 9781805127161

Author (1)

author image
Osvaldo Martin

Osvaldo Martin is a researcher at CONICET, in Argentina. He has experience using Markov Chain Monte Carlo methods to simulate molecules and perform Bayesian inference. He loves to use Python to solve data analysis problems. He is especially motivated by the development and implementation of software tools for Bayesian statistics and probabilistic modeling. He is an open-source developer, and he contributes to Python libraries like PyMC, ArviZ and Bambi among others. He is interested in all aspects of the Bayesian workflow, including numerical methods for inference, diagnosis of sampling, evaluation and criticism of models, comparison of models and presentation of results.
Read more about Osvaldo Martin