Search icon
Arrow left icon
All Products
Best Sellers
New Releases
Books
Videos
Audiobooks
Learning Hub
Newsletters
Free Learning
Arrow right icon
Bayesian Analysis with Python - Third Edition

You're reading from  Bayesian Analysis with Python - Third Edition

Product type Book
Published in Jan 2024
Publisher Packt
ISBN-13 9781805127161
Pages 394 pages
Edition 3rd Edition
Languages
Author (1):
Osvaldo Martin Osvaldo Martin
Profile icon Osvaldo Martin

Table of Contents (15) Chapters

Preface
1. Chapter 1 Thinking Probabilistically 2. Chapter 2 Programming Probabilistically 3. Chapter 3 Hierarchical Models 4. Chapter 4 Modeling with Lines 5. Chapter 5 Comparing Models 6. Chapter 6 Modeling with Bambi 7. Chapter 7 Mixture Models 8. Chapter 8 Gaussian Processes 9. Chapter 9 Bayesian Additive Regression Trees 10. Chapter 10 Inference Engines 11. Chapter 11 Where to Go Next 12. Bibliography
13. Other Books You May Enjoy
14. Index

2.2 Summarizing the posterior

Generally, the first task we will perform after sampling from the posterior is to check what the results look like. The plot_trace function from ArviZ is ideally suited to this task:

Code 2.3

az.plot_trace(idata)
PIC

Figure 2.1: A trace plot for the posterior of our_first_model

Figure 2.1 shows the default result when calling az.plot_trace; we get two subplots for each unobserved variable. The only unobserved variable in our model is θ. Notice that y is an observed variable representing the data; we do not need to sample that because we already know those values. Thus we only get two subplots. On the left, we have a Kernel Density Estimation (KDE) plot; this is like the smooth version of the histogram. Ideally, we want all chains to have a very similar KDE, like in Figure 2.1. On the right, we get the individual values at each sampling step; we get as many lines as chains. Ideally, we want it to be something that looks noisy, with no clear...

lock icon The rest of the chapter is locked
Register for a free Packt account to unlock a world of extra content!
A free Packt account unlocks extra newsletters, articles, discounted offers, and much more. Start advancing your knowledge today.
Unlock this book and the full library FREE for 7 days
Get unlimited access to 7000+ expert-authored eBooks and videos courses covering every tech area you can think of
Renews at $15.99/month. Cancel anytime}