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You're reading from  Bayesian Analysis with Python - Third Edition

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Published inJan 2024
Reading LevelExpert
PublisherPackt
ISBN-139781805127161
Edition3rd Edition
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Osvaldo Martin
Osvaldo Martin
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Osvaldo Martin

Osvaldo Martin is a researcher at CONICET, in Argentina. He has experience using Markov Chain Monte Carlo methods to simulate molecules and perform Bayesian inference. He loves to use Python to solve data analysis problems. He is especially motivated by the development and implementation of software tools for Bayesian statistics and probabilistic modeling. He is an open-source developer, and he contributes to Python libraries like PyMC, ArviZ and Bambi among others. He is interested in all aspects of the Bayesian workflow, including numerical methods for inference, diagnosis of sampling, evaluation and criticism of models, comparison of models and presentation of results.
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4.3 Generalizing the linear model

The linear model we have been using is a special case of a more general model, the Generalized Linear Model (GLM). The GLM is a generalization of the linear model that allows us to use different distributions for the likelihood. At a high level, we can write a Bayesian GLM like:

𝛼 ∼ a prior 𝛽 ∼ another prior θ ∼ some prior μ = 𝛼 + 𝛽X Y ∼ ϕ (f (μ ),θ)

is an arbitrary distribution; some common cases are Normal, Student’s t, Gamma, and NegativeBinomial. θ represents any auxiliary parameter the distribution may have, like σ for the Normal. We also have f, usually called the inverse link function. When is Normal, then f is the identity function. For distributions like Gamma and NegativeBinomial, f is usually the exponential function. Why do we need f? Because the linear model will generally be on the real line, but the μ parameter (or its equivalent) may be defined on a different domain. For instance, μ for the NegativeBinomial is defined for positive values, so we need to transform μ....

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Bayesian Analysis with Python - Third Edition
Published in: Jan 2024Publisher: PacktISBN-13: 9781805127161

Author (1)

author image
Osvaldo Martin

Osvaldo Martin is a researcher at CONICET, in Argentina. He has experience using Markov Chain Monte Carlo methods to simulate molecules and perform Bayesian inference. He loves to use Python to solve data analysis problems. He is especially motivated by the development and implementation of software tools for Bayesian statistics and probabilistic modeling. He is an open-source developer, and he contributes to Python libraries like PyMC, ArviZ and Bambi among others. He is interested in all aspects of the Bayesian workflow, including numerical methods for inference, diagnosis of sampling, evaluation and criticism of models, comparison of models and presentation of results.
Read more about Osvaldo Martin