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You're reading from  Python Data Science Essentials. - Third Edition

Product typeBook
Published inSep 2018
Reading LevelIntermediate
PublisherPackt
ISBN-139781789537864
Edition3rd Edition
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Alberto Boschetti
Alberto Boschetti
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Alberto Boschetti

Alberto Boschetti is a data scientist with expertise in signal processing and statistics. He holds a Ph.D. in telecommunication engineering and currently lives and works in London. In his work projects, he faces challenges ranging from natural language processing (NLP) and behavioral analysis to machine learning and distributed processing. He is very passionate about his job and always tries to stay updated about the latest developments in data science technologies, attending meet-ups, conferences, and other events.
Read more about Alberto Boschetti

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Graph loading, dumping, and sampling

Beyond NetworkX, graphs and networks can be generated and analyzed with other software. One of the best open source multiplatform software that can be used for their analysis is named Gephi. It's a visual tool and it doesn't require programming skills. It's freely available at http://gephi.github.io.

As in machine learning datasets, even graphs have standard formats for storing, loading, and exchanging. This way, you can create a graph with NetworkX, dump it to a file, and then load and analyze it with Gephi.

One of the most frequently used formats is Graph Modeling Language (GML). Now, let's see how we can dump a graph into a GML file:

In: dump_file_base = "dumped_graph"

# Be sure the dump_file file doesn't exist
def remove_file(filename):
import os
if os.path.exists(filename):
...
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Python Data Science Essentials. - Third Edition
Published in: Sep 2018Publisher: PacktISBN-13: 9781789537864

Author (1)

author image
Alberto Boschetti

Alberto Boschetti is a data scientist with expertise in signal processing and statistics. He holds a Ph.D. in telecommunication engineering and currently lives and works in London. In his work projects, he faces challenges ranging from natural language processing (NLP) and behavioral analysis to machine learning and distributed processing. He is very passionate about his job and always tries to stay updated about the latest developments in data science technologies, attending meet-ups, conferences, and other events.
Read more about Alberto Boschetti